Qatar strongly rejected the claims, describing them as a "systematic attack" by the UAE to draw attention away from its own violations of Qatari airspace.
Turkish President Tayyip Erdogan described the United Arab Emirates foreign minister as impertinent and spoiled by money on Thursday after he retweeted accusations that Ottoman forces looted the holy city of Medina during World War One.
Ali Abdullah Saleh was killed in a shooting attack on Monday after switching sides, abandoning his Houthi allies in favour of a Saudi-led alliance.
The foreign ministers of Qatar and Saudi Arabia attended round-table talks Monday ahead of a regional Gulf summit, in first such meeting since Riyadh cut all ties with Doha.
Ahmed Shafik, a former air force commander and government minister, has been seen as the strongest potential opponent of President Abdel Fattah al-Sisi, who is widely expected to run for a second term next year.
The General Civil Aviation Authority (GCAA) said its air accident investigation unit is treating the September 10 episode as a "serious incident”, an internationally recognised category which means an accident "nearly occurred”.